PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.MQD5S
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family NAC
Protein Properties Length: 289aa    MW: 33148.2 Da    PI: 5.8422
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.MQD5SgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM133.31.7e-4171331128
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 
                  lp+G+rF+Pt+eel+ +yL++k  g++ e++++i++vd+++++PwdLp + kvk++++ew+fF +   ky ++kr nr+t+ gyWk tgk++ ++++ 
  Araip.MQD5S   7 LPVGYRFRPTEEELLIHYLNNKHLGNDAEIKNTISQVDLCNFDPWDLPeQsKVKSDDQEWFFFNEL--KYMKNKRCNRKTNMGYWKITGKERIIKRTg 102
                  799***************************999**************95258899999*****886..778899******************999986 PP

          NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                  +++++g+k+tLvfy  ++p+ +kt+Wv+hey++
  Araip.MQD5S 103 TDSVIGTKRTLVFY--KRPHNVKTNWVLHEYHA 133
                  6778**********..788889*********95 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.12E-424152IPR003441NAC domain
PROSITE profilePS5100542.7687153IPR003441NAC domain
PfamPF023652.1E-238132IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    Send to blast
MAETRVLPVG YRFRPTEEEL LIHYLNNKHL GNDAEIKNTI SQVDLCNFDP WDLPEQSKVK  60
SDDQEWFFFN ELKYMKNKRC NRKTNMGYWK ITGKERIIKR TGTDSVIGTK RTLVFYKRPH  120
NVKTNWVLHE YHALHQKVGS CQSNIVLSRV TMNAEKREKK LKTKASNIIE EEVKCEDEPC  180
SEITGCVTQA TTEDAILPDN ACVSSEWQQP QAMDYEILSS GQRSSVAYSG NENNAALLPM  240
EATWRQDAGM NTECFWNSLF SSIDADPHAE FLNSVLAGDD QLYVDSGHH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A2e-29715017162NO APICAL MERISTEM PROTEIN
1ut4_B2e-29715017162NO APICAL MERISTEM PROTEIN
1ut7_A2e-29715017162NO APICAL MERISTEM PROTEIN
1ut7_B2e-29715017162NO APICAL MERISTEM PROTEIN
3swm_A2e-29715020165NAC domain-containing protein 19
3swm_B2e-29715020165NAC domain-containing protein 19
3swm_C2e-29715020165NAC domain-containing protein 19
3swm_D2e-29715020165NAC domain-containing protein 19
3swp_A2e-29715020165NAC domain-containing protein 19
3swp_B2e-29715020165NAC domain-containing protein 19
3swp_C2e-29715020165NAC domain-containing protein 19
3swp_D2e-29715020165NAC domain-containing protein 19
4dul_A2e-29715017162NAC domain-containing protein 19
4dul_B2e-29715017162NAC domain-containing protein 19
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016185093.10.0PREDICTED: NAC domain-containing protein 14-like
SwissprotB5X5703e-40NAC14_ARATH; NAC domain-containing protein 14
STRINGGLYMA07G05351.12e-45(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20652586
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33060.12e-41NAC 014